# neat: named entity annotation tool --- ![Screenshot](https://user-images.githubusercontent.com/952378/76674885-6b7b9000-65b4-11ea-9a36-1f9179dc5d6b.png) --- ### Table of contents [1. Introduction](https://github.com/qurator-spk/neat/blob/master/README.md#1-introduction) [2. User Guide](https://github.com/qurator-spk/neat/blob/master/README.md#2-user-guide)    [2.1 Installation](https://github.com/qurator-spk/neat/blob/master/README.md#21-installation)    [2.2 Data format](https://github.com/qurator-spk/neat/blob/master/README.md#22-data-format)    [2.3 Navigation](https://github.com/qurator-spk/neat/blob/master/README.md#23-navigation)    [2.4 Saving progress](https://github.com/qurator-spk/neat/blob/master/README.md#24-saving-progress) [3. Annotation Guidelines](https://github.com/qurator-spk/neat/blob/master/README.md#3-annotation-guidelines) ### 1. Introduction *neat* is a simple, browser-based tool for editing and annotating text with named entities to produce labeled data for training/testing/evaluation. It can be used to add or correct named entity labels and to correct the token text or tokenization (e.g. due to OCR/segmentation errors). *neat* is developed at the [Berlin State Library](https://staatsbibliothek-berlin.de/) for data annotation in the [SoNAR-IDH](https://sonar.fh-potsdam.de/) project and the [QURATOR](https://qurator.ai/) project. ### 2. User Guide #### 2.1 Installation *neat* runs locally as a pure HTML+JavaScript webpage in your web browser. No additional software needs to be installed, but JavaScript has to be enabled in the browser. Clone the repo using ``git clone https://github.com/qurator-spk/neat.git`` or download and extract the [ZIP](https://github.com/qurator-spk/neat/archive/master.zip). Make sure you have ``neat.html`` and ``neat.js`` in the same directory and open ``neat.html`` in a browser. Any fairly recent browser should work, but only Chrome and Firefox are tested. #### 2.2 Data format The source data we use for annotation are OCR results in [PAGE-XML](https://github.com/PRImA-Research-Lab/PAGE-XML) format. We provide a [Python tool](https://github.com/qurator-spk/page2tsv) for the transformation of OCR files in [PAGE-XML](https://github.com/PRImA-Research-Lab/PAGE-XML) into the [TSV format](https://github.com/qurator-spk/neat/blob/master/README.md#22-data-format) used by *neat*. The internal data format used by *neat* is based on the format used in the [GermEval2014 ](https://sites.google.com/site/germeval2014ner/data) Named Entity Recognition Shared Task. Text is encoded as one token per line, with name spans in the [IOB2](https://en.wikipedia.org/wiki/Inside%E2%80%93outside%E2%80%93beginning_(tagging)) format as tab-separated values: * the first column contains either * `#` a comment to indicate the source the sentence is taken from, or * ``>=1`` the token position within the sentence, or * ``0`` to mark sentence boundaries * the second column contains the token ``text`` * outer entity spans are encoded in the third column ``NE-TAG`` * embedded entity spans are encoded in the fourth column ``NE-EMB`` ##### Example (simple) ```tsv No. TOKEN NE-TAG NE-EMB # https://example.url 1 Donnerstag O O 2 , O O 3 1 O O 4 . O O 5 Januar O O 6 . O O 0 O O 1 Berliner B-ORG B-LOC 2 Tageblatt I-ORG O 3 . O O 0 O O 1 Nr O O 2 . O O 3 1 O O 4 . O O 0 O O 1 Seite O O 2 3 O O ``` For our purposes we extend this format by adding these (optional) values: * a fifth column for an ``ID`` for the outer ``NE-TAG`` from an authority file (*neat* supports automatic linking for [Wikidata](https://www.wikidata.org) identifiers) * column six for use as a variable ``url_id`` for [iiif](https://iiif.io/) Image API support (*neat* supports the embedding of image snippets into its interface to assist data annotation and correction if the PAGE-XML source contains word bounding boxes) * columns 7-10 are used for storing ``left,right,top,bottom`` pixel coordinates for the image snippets ##### Example (full) ```tsv No. TOKEN NE-TAG NE-EMB ID url_id left,right,top,bottom # https://example.url/iiif/left,right,top,bottom/full/0/default.jpg 1 Donnerstag O O - 0 174,352,358,390 2 , O O - 0 174,352,358,390 3 1 O O - 0 367,392,361,381 4 . O O - 0 370,397,352,379 5 Januar O O - 0 406,518,358,386 6 . O O - 0 406,518,358,386 0 1 Berliner B-ORG B-LOC Q455014 0 816,984,358,388 2 Tageblatt I-ORG O Q455014 0 1005,1208,360,387 3 . O O - 0 1005,1208,360,387 0 1 Nr O O - 0 1237,1288,360,382 2 . O O - 0 1237,1288,360,382 3 1 O O - 0 1304,1326,361,381 4 . O O - 0 1304,1326,361,381 0 1 Seite O O - 0 1837,1926,361,392 2 3 O O - 0 1939,1967,364,385 ``` #### 2.3 Navigation *neat* can be used both with a [keyboard](https://github.com/qurator-spk/neat#keyboard) or a [mouse](https://github.com/qurator-spk/neat#mouse), but for ergonomic reasons, we strongly recommend the use of below key combinations. ##### Keyboard | Key Combination| Action | |:---------|:-------------------------------------------| | Left | Move one cell left | | Right | Move one cell right | | Up | Move one row up | | Down | Move one row down | | PageDown | Move page down | | PageUp | Move page up | | Crtl+Up | Move entire table one row up | | Crtl+Down| Move entire table one row down | |----------|--------------------------------------------| | s t | Start new sentence in current row | | m e | Merge current row with row above | | s p | Create copy of current row | | d l | Delete current row | |----------|--------------------------------------------| | backspace| Set NE-TAG / NE-EMB to ``O`` | | b p | Set NE-TAG / NE-EMB to ``B-PER`` | | b l | Set NE-TAG / NE-EMB to ``B-LOC`` | | b o | Set NE-TAG / NE-EMB to ``B-ORG`` | | b w | Set NE-TAG / NE-EMB to ``B-WORK`` | | b c | Set NE-TAG / NE-EMB to ``B-CONF`` | | b e | Set NE-TAG / NE-EMB to ``B-EVT`` | | b t | Set NE-TAG / NE-EMB to ``B-TODO`` | | i p | Set NE-TAG / NE-EMB to ``I-PER`` | | i l | Set NE-TAG / NE-EMB to ``I-LOC`` | | i o | Set NE-TAG / NE-EMB to ``I-ORG`` | | i w | Set NE-TAG / NE-EMB to ``I-WORK`` | | i c | Set NE-TAG / NE-EMB to ``I-CONF`` | | i e | Set NE-TAG / NE-EMB to ``I-EVT`` | | i t | Set NE-TAG / NE-EMB to ``I-TODO`` | |----------|--------------------------------------------| | enter | Edit TOKEN or ID | | esc | Close TOKEN or ID edit field without | | | application of changes | |----------|--------------------------------------------| | l a | add one display row | | l r | remove on display row (minimum is 5) | |----------|--------------------------------------------| ##### Mouse * use mouse wheel to scroll up and down * left-click `<<` and `>>` to move 15 rows up or down * left-click `O` in the `NE-TAG` or `NE-EMB` column to open a drop-down menu and subsequently select any of the supported NE-Tags to tag a token or change an existing tag * left-click the `NE-TAG` or `NE-EMB` column and select `O` to remove a tag * left-click the `TOKEN` column to edit the token text * left-click the `POSITION` and select `split` from the drop-down menu to create a copy of the current row below * left-click the `POSITION` and select `merge` from the drop-down menu to merge the current row with the row above * left-click the `POSITION` and select `start-sentence` from the drop-down menu to mark the start of a new sentence #### 2.4 Saving progress *neat* runs fully locally in the browser. Therefore it can not automatically save any changes you made to disk. You have to use the `Save Changes` button to do so manually from time to time. ### 3. Annotation Guidelines [Annotation Guidelines](https://zenodo.org/record/5116015)