from tensorflow.keras.models import * from tensorflow.keras.layers import * from tensorflow.keras import layers from tensorflow.keras.regularizers import l2 resnet50_Weights_path = './pretrained_model/resnet50_weights_tf_dim_ordering_tf_kernels_notop.h5' IMAGE_ORDERING = 'channels_last' MERGE_AXIS = -1 def one_side_pad(x): x = ZeroPadding2D((1, 1), data_format=IMAGE_ORDERING)(x) if IMAGE_ORDERING == 'channels_first': x = Lambda(lambda x: x[:, :, :-1, :-1])(x) elif IMAGE_ORDERING == 'channels_last': x = Lambda(lambda x: x[:, :-1, :-1, :])(x) return x def identity_block(input_tensor, kernel_size, filters, stage, block): """The identity block is the block that has no conv layer at shortcut. # Arguments input_tensor: input tensor kernel_size: defualt 3, the kernel size of middle conv layer at main path filters: list of integers, the filterss of 3 conv layer at main path stage: integer, current stage label, used for generating layer names block: 'a','b'..., current block label, used for generating layer names # Returns Output tensor for the block. """ filters1, filters2, filters3 = filters if IMAGE_ORDERING == 'channels_last': bn_axis = 3 else: bn_axis = 1 conv_name_base = 'res' + str(stage) + block + '_branch' bn_name_base = 'bn' + str(stage) + block + '_branch' x = Conv2D(filters1, (1, 1), data_format=IMAGE_ORDERING, name=conv_name_base + '2a')(input_tensor) x = BatchNormalization(axis=bn_axis, name=bn_name_base + '2a')(x) x = Activation('relu')(x) x = Conv2D(filters2, kernel_size, data_format=IMAGE_ORDERING, padding='same', name=conv_name_base + '2b')(x) x = BatchNormalization(axis=bn_axis, name=bn_name_base + '2b')(x) x = Activation('relu')(x) x = Conv2D(filters3, (1, 1), data_format=IMAGE_ORDERING, name=conv_name_base + '2c')(x) x = BatchNormalization(axis=bn_axis, name=bn_name_base + '2c')(x) x = layers.add([x, input_tensor]) x = Activation('relu')(x) return x def conv_block(input_tensor, kernel_size, filters, stage, block, strides=(2, 2)): """conv_block is the block that has a conv layer at shortcut # Arguments input_tensor: input tensor kernel_size: defualt 3, the kernel size of middle conv layer at main path filters: list of integers, the filterss of 3 conv layer at main path stage: integer, current stage label, used for generating layer names block: 'a','b'..., current block label, used for generating layer names # Returns Output tensor for the block. Note that from stage 3, the first conv layer at main path is with strides=(2,2) And the shortcut should have strides=(2,2) as well """ filters1, filters2, filters3 = filters if IMAGE_ORDERING == 'channels_last': bn_axis = 3 else: bn_axis = 1 conv_name_base = 'res' + str(stage) + block + '_branch' bn_name_base = 'bn' + str(stage) + block + '_branch' x = Conv2D(filters1, (1, 1), data_format=IMAGE_ORDERING, strides=strides, name=conv_name_base + '2a')(input_tensor) x = BatchNormalization(axis=bn_axis, name=bn_name_base + '2a')(x) x = Activation('relu')(x) x = Conv2D(filters2, kernel_size, data_format=IMAGE_ORDERING, padding='same', name=conv_name_base + '2b')(x) x = BatchNormalization(axis=bn_axis, name=bn_name_base + '2b')(x) x = Activation('relu')(x) x = Conv2D(filters3, (1, 1), data_format=IMAGE_ORDERING, name=conv_name_base + '2c')(x) x = BatchNormalization(axis=bn_axis, name=bn_name_base + '2c')(x) shortcut = Conv2D(filters3, (1, 1), data_format=IMAGE_ORDERING, strides=strides, name=conv_name_base + '1')(input_tensor) shortcut = BatchNormalization(axis=bn_axis, name=bn_name_base + '1')(shortcut) x = layers.add([x, shortcut]) x = Activation('relu')(x) return x def resnet50_unet_light(n_classes, input_height=224, input_width=224, weight_decay=1e-6, pretraining=False): assert input_height % 32 == 0 assert input_width % 32 == 0 img_input = Input(shape=(input_height, input_width, 3)) if IMAGE_ORDERING == 'channels_last': bn_axis = 3 else: bn_axis = 1 x = ZeroPadding2D((3, 3), data_format=IMAGE_ORDERING)(img_input) x = Conv2D(64, (7, 7), data_format=IMAGE_ORDERING, strides=(2, 2), kernel_regularizer=l2(weight_decay), name='conv1')(x) f1 = x x = BatchNormalization(axis=bn_axis, name='bn_conv1')(x) x = Activation('relu')(x) x = MaxPooling2D((3, 3), data_format=IMAGE_ORDERING, strides=(2, 2))(x) x = conv_block(x, 3, [64, 64, 256], stage=2, block='a', strides=(1, 1)) x = identity_block(x, 3, [64, 64, 256], stage=2, block='b') x = identity_block(x, 3, [64, 64, 256], stage=2, block='c') f2 = one_side_pad(x) x = conv_block(x, 3, [128, 128, 512], stage=3, block='a') x = identity_block(x, 3, [128, 128, 512], stage=3, block='b') x = identity_block(x, 3, [128, 128, 512], stage=3, block='c') x = identity_block(x, 3, [128, 128, 512], stage=3, block='d') f3 = x x = conv_block(x, 3, [256, 256, 1024], stage=4, block='a') x = identity_block(x, 3, [256, 256, 1024], stage=4, block='b') x = identity_block(x, 3, [256, 256, 1024], stage=4, block='c') x = identity_block(x, 3, [256, 256, 1024], stage=4, block='d') x = identity_block(x, 3, [256, 256, 1024], stage=4, block='e') x = identity_block(x, 3, [256, 256, 1024], stage=4, block='f') f4 = x x = conv_block(x, 3, [512, 512, 2048], stage=5, block='a') x = identity_block(x, 3, [512, 512, 2048], stage=5, block='b') x = identity_block(x, 3, [512, 512, 2048], stage=5, block='c') f5 = x if pretraining: model = Model(img_input, x).load_weights(resnet50_Weights_path) v512_2048 = Conv2D(512, (1, 1), padding='same', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay))(f5) v512_2048 = (BatchNormalization(axis=bn_axis))(v512_2048) v512_2048 = Activation('relu')(v512_2048) v512_1024 = Conv2D(512, (1, 1), padding='same', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay))(f4) v512_1024 = (BatchNormalization(axis=bn_axis))(v512_1024) v512_1024 = Activation('relu')(v512_1024) o = (UpSampling2D((2, 2), data_format=IMAGE_ORDERING))(v512_2048) o = (concatenate([o, v512_1024], axis=MERGE_AXIS)) o = (ZeroPadding2D((1, 1), data_format=IMAGE_ORDERING))(o) o = (Conv2D(512, (3, 3), padding='valid', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay)))(o) o = (BatchNormalization(axis=bn_axis))(o) o = Activation('relu')(o) o = (UpSampling2D((2, 2), data_format=IMAGE_ORDERING))(o) o = (concatenate([o, f3], axis=MERGE_AXIS)) o = (ZeroPadding2D((1, 1), data_format=IMAGE_ORDERING))(o) o = (Conv2D(256, (3, 3), padding='valid', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay)))(o) o = (BatchNormalization(axis=bn_axis))(o) o = Activation('relu')(o) o = (UpSampling2D((2, 2), data_format=IMAGE_ORDERING))(o) o = (concatenate([o, f2], axis=MERGE_AXIS)) o = (ZeroPadding2D((1, 1), data_format=IMAGE_ORDERING))(o) o = (Conv2D(128, (3, 3), padding='valid', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay)))(o) o = (BatchNormalization(axis=bn_axis))(o) o = Activation('relu')(o) o = (UpSampling2D((2, 2), data_format=IMAGE_ORDERING))(o) o = (concatenate([o, f1], axis=MERGE_AXIS)) o = (ZeroPadding2D((1, 1), data_format=IMAGE_ORDERING))(o) o = (Conv2D(64, (3, 3), padding='valid', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay)))(o) o = (BatchNormalization(axis=bn_axis))(o) o = Activation('relu')(o) o = (UpSampling2D((2, 2), data_format=IMAGE_ORDERING))(o) o = (concatenate([o, img_input], axis=MERGE_AXIS)) o = (ZeroPadding2D((1, 1), data_format=IMAGE_ORDERING))(o) o = (Conv2D(32, (3, 3), padding='valid', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay)))(o) o = (BatchNormalization(axis=bn_axis))(o) o = Activation('relu')(o) o = Conv2D(n_classes, (1, 1), padding='same', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay))(o) o = (BatchNormalization(axis=bn_axis))(o) o = (Activation('softmax'))(o) model = Model(img_input, o) return model def resnet50_unet(n_classes, input_height=224, input_width=224, weight_decay=1e-6, pretraining=False): assert input_height % 32 == 0 assert input_width % 32 == 0 img_input = Input(shape=(input_height, input_width, 3)) if IMAGE_ORDERING == 'channels_last': bn_axis = 3 else: bn_axis = 1 x = ZeroPadding2D((3, 3), data_format=IMAGE_ORDERING)(img_input) x = Conv2D(64, (7, 7), data_format=IMAGE_ORDERING, strides=(2, 2), kernel_regularizer=l2(weight_decay), name='conv1')(x) f1 = x x = BatchNormalization(axis=bn_axis, name='bn_conv1')(x) x = Activation('relu')(x) x = MaxPooling2D((3, 3), data_format=IMAGE_ORDERING, strides=(2, 2))(x) x = conv_block(x, 3, [64, 64, 256], stage=2, block='a', strides=(1, 1)) x = identity_block(x, 3, [64, 64, 256], stage=2, block='b') x = identity_block(x, 3, [64, 64, 256], stage=2, block='c') f2 = one_side_pad(x) x = conv_block(x, 3, [128, 128, 512], stage=3, block='a') x = identity_block(x, 3, [128, 128, 512], stage=3, block='b') x = identity_block(x, 3, [128, 128, 512], stage=3, block='c') x = identity_block(x, 3, [128, 128, 512], stage=3, block='d') f3 = x x = conv_block(x, 3, [256, 256, 1024], stage=4, block='a') x = identity_block(x, 3, [256, 256, 1024], stage=4, block='b') x = identity_block(x, 3, [256, 256, 1024], stage=4, block='c') x = identity_block(x, 3, [256, 256, 1024], stage=4, block='d') x = identity_block(x, 3, [256, 256, 1024], stage=4, block='e') x = identity_block(x, 3, [256, 256, 1024], stage=4, block='f') f4 = x x = conv_block(x, 3, [512, 512, 2048], stage=5, block='a') x = identity_block(x, 3, [512, 512, 2048], stage=5, block='b') x = identity_block(x, 3, [512, 512, 2048], stage=5, block='c') f5 = x if pretraining: Model(img_input, x).load_weights(resnet50_Weights_path) v1024_2048 = Conv2D(1024, (1, 1), padding='same', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay))( f5) v1024_2048 = (BatchNormalization(axis=bn_axis))(v1024_2048) v1024_2048 = Activation('relu')(v1024_2048) o = (UpSampling2D((2, 2), data_format=IMAGE_ORDERING))(v1024_2048) o = (concatenate([o, f4], axis=MERGE_AXIS)) o = (ZeroPadding2D((1, 1), data_format=IMAGE_ORDERING))(o) o = (Conv2D(512, (3, 3), padding='valid', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay)))(o) o = (BatchNormalization(axis=bn_axis))(o) o = Activation('relu')(o) o = (UpSampling2D((2, 2), data_format=IMAGE_ORDERING))(o) o = (concatenate([o, f3], axis=MERGE_AXIS)) o = (ZeroPadding2D((1, 1), data_format=IMAGE_ORDERING))(o) o = (Conv2D(256, (3, 3), padding='valid', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay)))(o) o = (BatchNormalization(axis=bn_axis))(o) o = Activation('relu')(o) o = (UpSampling2D((2, 2), data_format=IMAGE_ORDERING))(o) o = (concatenate([o, f2], axis=MERGE_AXIS)) o = (ZeroPadding2D((1, 1), data_format=IMAGE_ORDERING))(o) o = (Conv2D(128, (3, 3), padding='valid', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay)))(o) o = (BatchNormalization(axis=bn_axis))(o) o = Activation('relu')(o) o = (UpSampling2D((2, 2), data_format=IMAGE_ORDERING))(o) o = (concatenate([o, f1], axis=MERGE_AXIS)) o = (ZeroPadding2D((1, 1), data_format=IMAGE_ORDERING))(o) o = (Conv2D(64, (3, 3), padding='valid', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay)))(o) o = (BatchNormalization(axis=bn_axis))(o) o = Activation('relu')(o) o = (UpSampling2D((2, 2), data_format=IMAGE_ORDERING))(o) o = (concatenate([o, img_input], axis=MERGE_AXIS)) o = (ZeroPadding2D((1, 1), data_format=IMAGE_ORDERING))(o) o = (Conv2D(32, (3, 3), padding='valid', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay)))(o) o = (BatchNormalization(axis=bn_axis))(o) o = Activation('relu')(o) o = Conv2D(n_classes, (1, 1), padding='same', data_format=IMAGE_ORDERING, kernel_regularizer=l2(weight_decay))(o) o = (BatchNormalization(axis=bn_axis))(o) o = (Activation('softmax'))(o) model = Model(img_input, o) return model