check_data_subdir() { result=0 if git submodule status $DATA_SUBDIR | grep -q '^-'; then echo "$DATA_SUBDIR/ is not an initialized submodule"; result=1 fi if ! [ -e $DATA_SUBDIR/.git/annex ]; then echo "$DATA_SUBDIR/ is not a git annex repository"; result=1 fi if ! (cd $DATA_SUBDIR && git annex version | grep -q 'local repository version: 7'); then echo "$DATA_SUBDIR/ is not a git annex repository version 7"; result=1 fi if ! (cd $DATA_SUBDIR && git remote | grep -q '^nfs$'); then echo "$DATA_SUBDIR/ has no git remote 'nfs'"; result=1 fi return $result } annex_get() { if [[ "$1" = '--allow_symlinks' ]]; then allow_symlinks=1 shift else allow_symlinks=0 fi file_pattern="$1" ( cd $DATA_SUBDIR git annex get $file_pattern # fsck seems to be necessary to fix the files if we are in a submodule git annex fsck $file_pattern # Check that there are no symlinks = only unlocked files. This is needed for # Docker builds, as we cannot dereference symlinks in a Dockerfile COPY. if [[ $allow_symlinks = 0 ]]; then git ls-files $file_pattern | while read f; do if ! [[ -f "$f" ]]; then echo "$DATA_SUBDIR/$f is not a regular file – Is an unlock needed?" exit fi done fi ) } download_to() { download_source="$1" unpack_to="$2" ( cd data tmpf=`mktemp 'tmp.XXXXX'` wget -O $tmpf "$download_source" mkdir -p "$unpack_to" # XXX Unpacking relies on tar -a unpacking any tar compression, might not work everywhere? tar -C "$unpack_to" -af $tmpf -xv rm -f $tmpf ) } suggest_commands() { echo "Suggested commands:" echo echo "git submodule update --init" echo "(cd $DATA_SUBDIR && git annex init --version=7)" echo "(cd $DATA_SUBDIR && git remote add nfs /<... path to ...>/GitNX-Repository/qurator/qurator-data)" } handle_data() { if [[ "$1" = '--no-download' ]]; then no_download=1 shift else no_download=0 fi if ! check_data_subdir; then if [[ $no_download = 1 ]]; then select choice in "Abort to manually fix $DATA_SUBDIR submodule"; do if [ $REPLY = 1 ]; then suggest_commands exit fi done else select choice in "Abort to manually fix $DATA_SUBDIR submodule" "Download data files from the web"; do if [ $REPLY = 1 ]; then suggest_commands exit else get_from_web break fi done fi else get_from_annex fi }