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Code Issues Releases Wiki Activity

🎨 Improve log/output a bit

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This commit is contained in:
Gerber, Mike 2022-04-07 16:35:18 +02:00
parent db79960ba1
commit 9227575555
1 changed files with 10 additions and 9 deletions
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19
qurator/modstool/modstool.py
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@ -20,6 +20,7 @@ ns = {
'mods': 'http://www.loc.gov/mods/v3'
}
logger = logging.getLogger('modstool')
class TagGroup:
"""Helper class to simplify the parsing and checking of MODS metadata"""
@ -466,8 +467,8 @@ def process(mets_files: List[str], output_file: str, output_csv: str, output_xls
mets_files_real = []
for m in mets_files:
if os.path.isdir(m):
logging.info('Scanning directory {}'.format(m))
mets_files_real.extend(f.path for f in tqdm(os.scandir(m))
logger.info('Scanning directory {}'.format(m))
mets_files_real.extend(f.path for f in tqdm(os.scandir(m), leave=False)
if f.is_file() and not f.name.startswith('.'))
else:
mets_files_real.append(m)
@ -476,8 +477,8 @@ def process(mets_files: List[str], output_file: str, output_csv: str, output_xls
with open(output_file + '.warnings.csv', 'w') as csvfile:
csvwriter = csv.writer(csvfile)
mods_info = []
logging.info('Processing METS files')
for mets_file in tqdm(mets_files_real):
logger.info('Processing METS files')
for mets_file in tqdm(mets_files_real, leave=False):
try:
root = ET.parse(mets_file).getroot()
mets = root # XXX .find('mets:mets', ns) does not work here
@ -503,8 +504,8 @@ def process(mets_files: List[str], output_file: str, output_csv: str, output_xls
for caught_warning in caught_warnings:
csvwriter.writerow([mets_file, caught_warning.message])
except Exception as e:
warnings.warn('Exception in {}:\n{}'.format(mets_file, e))
import traceback; traceback.print_exc()
logger.error('Exception in {}: {}'.format(mets_file, e))
#import traceback; traceback.print_exc()
# Convert the mods_info List[Dict] to a pandas DataFrame
columns = []
@ -517,13 +518,13 @@ def process(mets_files: List[str], output_file: str, output_csv: str, output_xls
mods_info_df = pd.DataFrame(data=data, index=index, columns=columns)
# Pickle the DataFrame
logging.info('Writing DataFrame to {}'.format(output_file))
logger.info('Writing DataFrame to {}'.format(output_file))
mods_info_df.to_pickle(output_file)
if output_csv:
logging.info('Writing CSV to {}'.format(output_csv))
logger.info('Writing CSV to {}'.format(output_csv))
mods_info_df.to_csv(output_csv)
if output_xlsx:
logging.info('Writing Excel .xlsx to {}'.format(output_xlsx))
logger.info('Writing Excel .xlsx to {}'.format(output_xlsx))
mods_info_df.to_excel(output_xlsx)