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@ -2,22 +2,15 @@
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sbb_binarize CLI
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sbb_binarize CLI
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"""
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"""
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from argparse import ArgumentParser
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from click import command, option, argument, version_option
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from .sbb_binarize import SbbBinarizer
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from .sbb_binarize import SbbBinarizer
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def main():
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@command()
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parser = ArgumentParser()
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@version_option()
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@option('--patches/--no-patches', default=True, help='by enabling this parameter you let the model to see the image in patches.')
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parser.add_argument('-i', '--image', default=None, help='image.')
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@option('--model-dir', '-m', required=True, help='directory containing models for prediction')
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parser.add_argument('-p', '--patches', default=False, help='by setting this parameter to true you let the model to see the image in patches.')
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@argument('input_image')
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parser.add_argument('-s', '--save', default=False, help='save prediction with a given name here. The name and format should be given (outputname.tif).')
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@argument('output_image')
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parser.add_argument('-m', '--model', default=None, help='models directory.')
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def main(patches, model_dir, input_image, output_image):
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SbbBinarizer(model_dir).run(image_path=input_image, use_patches=patches, save=output_image)
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options = parser.parse_args()
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binarizer = SbbBinarizer(model_dir=options.model)
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binarizer.run(image_path=options.image, patches=options.patches, save=options.save)
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if __name__ == "__main__":
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main()
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